------- SECIS element -- id:1 -- grade:A ----
 Chromosome = CM007948.1:subseq_75405324,103794_ Strand = + Positions = 58093 - 58171
 Found by:  Infernal (score=14.33) Covels (score=16.93)
 Stem2 length = 8   Apical loop length = 18   Insertion in stem2 = 0, 0
 Free Energy = -13.03

         ..(((((((.......(((((((((((((((................)))))))))))))))...........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuu--u-uuucaugaccggc
         ..(((([((.--....([[(((([{((({(..................)})))}]))))]]).......-...))]))))..
 target  GGUGGCAUGU--UGUAUGAAGGUGAGGCUUGAAAACAGUGAUUCUGUGGUGCCAAGCCUGAGUUCUAGG-GUCCAGGCCAGU
                         ****           ^^^                        ****                    

------- SECIS element -- id:2 -- grade:A ----
 Chromosome = CM007948.1:subseq_75405324,103794_ Strand = + Positions = 50961 - 51039
 Found by:  Infernal (score=14.33) Covels (score=16.93)
 Stem2 length = 8   Apical loop length = 18   Insertion in stem2 = 0, 0
 Free Energy = -13.03

         ..(((((((.......(((((((((((((((................)))))))))))))))...........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuu--u-uuucaugaccggc
         ..(((([((.--....([[(((([{((({(..................)})))}]))))]]).......-...))]))))..
 target  GGUGGCAUGU--UGUAUGAAGGUGAGGCUUGAAAACAGUGAUUCUGUGGUGCCAAGCCUGAGUUCUAGG-GUCCAGGCCAGU
                         ****           ^^^                        ****                    

------- SECIS element -- id:3 -- grade:B ----
 Chromosome = CM007948.1:subseq_75405324,103794_ Strand = - Positions = 72004 - 71929
 Found by:  Infernal (score=12.71) Covels (score=3.83)
 Stem2 length = 10   Apical loop length = 16   Insertion in stem2 = 0, 0
 Free Energy = -24.49

         ..(((((((.......((((((((((.((((..................)))).))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccug-gcccgAAAcCcuuuuuggggu-gggc-caggcCuGAUGuuuuuucaugaccggc
         ..((((({((--....{[[{[(({(({(((((................)))))}))}))]}]]}..--..-))})))))..
 target  GUGGGCUCUG--UGAAUGAUGUUUCAUAGCCCUGUCCUGUUGCAGAGUGGGCUCUGUGAAUGAUGU--UU-CAUAGCCCUG
                         ****               ^^                       ****                 

------- SECIS element -- id:4 -- grade:C ----
 Chromosome = CM007948.1:subseq_75405324,103794_ Strand = + Positions = 3509 - 3588
 Found by:  Infernal (score=10.73)
 Stem2 length = 8   Apical loop length = 23   Insertion in stem2 = 0, 0
 Free Energy = -9.6

         ..(((((((.......(((((((((((((((.....................)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC------cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ...([([(((--....{[[{{(((({((((.......................))))}))))}}]]}..--...)))])])...
 target  GAGAGAACAG--UAUAUGACUAGGGUGGCUGGAGUCUUUGACAAUUUUUUUGGGGCCUUCCUCUGAUAC--CGCCUGGUAUAGA
                         ****                                           ****                 

------- SECIS element -- id:5 -- grade:B ----
 Chromosome = CM007948.1:subseq_75405324,103794_ Strand = - Positions = 85215 - 85153
 Found by:  Infernal (score=10.68)
 Stem2 length = 10   Apical loop length = 9   Insertion in stem2 = 0, 1
 Free Energy = -29.0

         ..(((((((.......(((((((((((((((...............))))))))).))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccagg-cCuGAUGuuuuuucaugaccggc
         .({((((((---(...{[[{((((((((((........--------.)))))))).))}]]}----..-)))))))}).
 target  UCUGCCGGC---UGUUUGACAAGGCCGGCUGUUUGACA--------AGGCCGGCUGUUUGAC----AA-GGCCGGCUGU
                         ****                                      ****